Australian New Crops Info 2016
Supported by the Rural Industries Research and Development Corporation

Listing of Interesting Plants of the World:

Nicotiana arentsii

 

 

This species is usually known as:

Nicotiana arentsii

 

This species has no synonyms in The Plant List

 

No common names have been found

 

 

Trends (five databases) 1901-2013:
[Number of papers mentioning Nicotiana arentsii: 12]

 

 

Popularity of Nicotiana arentsii over time
[Left-hand Plot: Plot of numbers of papers mentioning Nicotiana arentsii (histogram and left hand axis scale of left-hand plot) and line of best fit, 1901 to 2013 (equation and % variation accounted for in box); Right-hand Plot: Plot of a proportional micro index, derived from numbers of papers mentioning Nicotiana arentsii as a proportion (scaled by multiplying by one million) of the approximate total number of papers available in databases for that year (frequency polygon and left-hand axis scale of right-hand plot) and line of best fit, 1901 to 2013 (equation and % variation accounted for in box)] 

[For larger charts showing the numbers of papers that have mentioned this species over years, select this link; there are links to come back from there]

 

Keywords

[Total number of keywords included in the papers that mentioned this species: 63]

 

Nicotiana (4), Polyploidy (4), Allopolyploidy (3), Recombination (3), Circular dichroism spectra (2), Cloning (2), Differential scanning calorimetry (2), Glutamine synthetase (2), Homoploid hybridization (2), hybridization (2), Low-copy nuclear gene (2), Protein phylogeny (2), Protein secondary structure (2), SINE retroelement (2), Tobacco genome (2), adaptation (1), Aldolase (1), concerted evolution (1), DNA curvature (1), double-strand conformation polymorphism (DSCP) (1), electrophoretic mobility (1), evolution (1), fungal diseases of plants (1), Gene tree (1), homoploid hybrid (1), interlocus homogenization (1), matK (1), ndhF (1), network (1), parental divergence (1), Phylogeny (1), plant health (1), plant pathogenic fungi (1), polyploid (1), reticulate evolution (1), Salt stress (1), satellite repeats (1), speciation (1), subtelomeric satellite repeats (1), telomeric heterochromatin (1), trnL-F (1), trnS-G (1)

 

[If all keywords are not here (as indicated by .....), they can be accessed from this link; there are links to come back from there]

 

 

Most likely scope for crop use/product (%):
[Please note: When there are only a few papers mentioning a species, care should be taken with the interpretation of these crop use/product results; as well, a mention may relate to the use of a species, or the context in which it grows, rather than a product]

 

hemiparasite (97.78), medicinal (0.26), timber (0.24), fruit (0.19), poison (0.19), weed (0.14), ornamental (0.12), starch (0.09), cereal (0.06), nutraceutical (0.06)…..

 

[To see the full list of crop use/product outcomes, from searching abstracts of the papers that have mentioned this species, select this link; details of the analysis process have also been included; there are links to come back from there]

 

 

Recent mentions of this species in the literature:
[since 2012, with links to abstracts; The references from 1901-2013 which have been used for the trend, keyword and crop use/product analyses below, are listed below these references]

 

Matyášek R, Dobešová E, Húska D, Ježková I, Soltis PS, Soltis DE and Kovařík A (2016) Interpopulation hybridization generates meiotically stable rDNA epigenetic variants in allotetraploid Tragopogon mirus. The Plant Journal 85, 362-377. http://dx.doi.org/10.1111/tpj.13110

McCarthy EW, Arnold SEJ, et al. (2015) The effect of polyploidy and hybridization on the evolution of floral colour in Nicotiana (Solanaceae). Ann. Bot. 115, 1117-1131. http://aob.oxfordjournals.org/cgi/content/abstract/115/7/1117

Chen K, Dorlhac de Borne F, Szegedi E and Otten L (2014) Deep sequencing of the ancestral tobacco species Nicotiana tomentosiformis reveals multiple T-DNA inserts and a complex evolutionary history of natural transformation in the genus Nicotiana. The Plant Journal 80, 669-682. http://dx.doi.org/10.1111/tpj.12661

Emadzade K, Jang T-S, Macas J, #x, Kova, ik A, Novak P, Parker J and Weiss-Schneeweiss H (2014) Differential amplification of satellite PaB6 in chromosomally hypervariable Prospero autumnale complex (Hyacinthaceae). Ann. Bot. 114, 1597-1608. http://aob.oxfordjournals.org/cgi/content/abstract/114/8/1597

Kelly LJ, Leitch AR, Clarkson JJ, Knapp S and Chase MW (2013) RECONSTRUCTING THE COMPLEX EVOLUTIONARY ORIGIN OF WILD ALLOPOLYPLOID TOBACCOS (NICOTIANA SECTION SUAVEOLENTES). Evolution 67, 80-94. http://dx.doi.org/10.1111/j.1558-5646.2012.01748.x

Matyášek R, Fulneček J and Kovařík A (2013) Evaluation of DNA bending models in their capacity to predict electrophoretic migration anomalies of satellite DNA sequences. ELECTROPHORESIS 34, 2511-2521. http://dx.doi.org/10.1002/elps.201300227

Kelly LJ, Leitch AR, Clarkson JJ, Knapp S and Chase MW (2012) RECONSTRUCTING THE COMPLEX EVOLUTIONARY ORIGIN OF WILD ALLOPOLYPLOID TOBACCOS (NICOTIANA SECTION SUAVEOLENTES). Evolution, no-no. http://dx.doi.org/10.1111/j.1558-5646.2012.01748.x

 

 

References 1901-2013 (and links to abstracts):
[Number of papers mentioning Nicotiana arentsii: 12; Any undated papers have been included at the end]

 

Kelly LJ, Leitch AR, Clarkson JJ, Knapp S and Chase MW (2012) RECONSTRUCTING THE COMPLEX EVOLUTIONARY ORIGIN OF WILD ALLOPOLYPLOID TOBACCOS (NICOTIANA SECTION SUAVEOLENTES). Evolution, no-no.  http://dx.doi.org/10.1111/j.1558-5646.2012.01748.x

Bennett MD and Leitch IJ (2011) Nuclear DNA amounts in angiosperms: targets, trends and tomorrow. Ann. Bot. 107, 467-590.  http://aob.oxfordjournals.org/cgi/content/abstract/107/3/467

Makarova SS, Minina EA, et al. (2011) Orthologues of a plant-specific At-4/1 gene in the genus Nicotiana and the structural properties of bacterially expressed 4/1 protein. Biochimie 93, 1770-1778.  http://www.sciencedirect.com/science/article/pii/S0300908411002148

Matyasek R, Fulnecek J, Leitch A and Kovarik A (2011) Analysis of two abundant, highly related satellites in the allotetraploid Nicotiana arentsii using double-strand conformation polymorphism analysis and sequencing. New Phytol 192, 747-59.

Matyasek R, Fulnecek J, Leitch AR and Kovarik A (2011) Analysis of two abundant, highly related satellites in the allotetraploid Nicotiana arentsii using double-strand conformation polymorphism analysis and sequencing. New Phytologist 192, 747-759.  http://dx.doi.org/10.1111/j.1469-8137.2011.03827.x

Clarkson JJ, Kelly LJ, Leitch AR, Knapp S and Chase MW (2010) Nuclear glutamine synthetase evolution in Nicotiana: Phylogenetics and the origins of allotetraploid and homoploid (diploid) hybrids. Molecular Phylogenetics and Evolution 55, 99-112.  http://www.sciencedirect.com/science/article/pii/S1055790309003972

Koukalova B, Moraes AP, Renny-Byfield S, Matyasek R, Leitch AR and Kovarik A (2010) Fall and rise of satellite repeats in allopolyploids of Nicotiana over c. 5 million years. New Phytologist 186, 148-160.  http://dx.doi.org/10.1111/j.1469-8137.2009.03101.x

Paun O, Forest F, Fay MF and Chase MW (2009) Hybrid speciation in angiosperms: parental divergence drives ploidy. New Phytologist 182, 507-518.  http://dx.doi.org/10.1111/j.1469-8137.2009.02767.x

Clarkson JJ, Knapp S, Garcia VF, Olmstead RG, Leitch AR and Chase MW (2004) Phylogenetic relationships in Nicotiana (Solanaceae) inferred from multiple plastid DNA regions. Molecular Phylogenetics and Evolution 33, 75-90.  http://www.sciencedirect.com/science/article/pii/S1055790304001447

Chase MW, Knapp S, Cox AV, Clarkson JJ, Butsko Y, Joseph J, Savolainen V and Parokonny AS (2003) Molecular Systematics, GISH and the Origin of Hybrid Taxa in Nicotiana (Solanaceae). Ann. Bot. 92, 107-127.  http://aob.oxfordjournals.org/cgi/content/abstract/92/1/107

Yamada S, Komori T, Hashimoto A, Kuwata S, Imaseki H and Kubo T (2000) Differential expression of plastidic aldolase genes in Nicotiana plants under salt stress. Plant Science 154, 61-69.  http://www.sciencedirect.com/science/article/pii/S0168945200001886

Dukes PD (1970) Fusarium wilt of Nicotiana arentsii. Tobacco science 14, 14.

Bennett MD and Leitch IJ Nuclear DNA amounts in angiosperms: targets, trends and tomorrow. Ann. Bot. 107, 467-590.  http://aob.oxfordjournals.org/cgi/content/abstract/107/3/467

Clarkson JJ, Kelly LJ, Leitch AR, Knapp S and Chase MW Nuclear glutamine synthetase evolution in Nicotiana: Phylogenetics and the origins of allotetraploid and homoploid (diploid) hybrids. Molecular Phylogenetics and Evolution 55, 99-112.  http://www.sciencedirect.com/science/article/pii/S1055790309003972

Makarova SS, Minina EA, et al. Orthologues of a plant-specific At-4/1 gene in the genus Nicotiana and the structural properties of bacterially expressed 4/1 protein. Biochimie 93, 1770-1778.  http://www.sciencedirect.com/science/article/pii/S0300908411002148

Matyasek R, Fulnecek J, Leitch AR and Kovarik A Analysis of two abundant, highly related satellites in the allotetraploid Nicotiana arentsii using double-strand conformation polymorphism analysis and sequencing. New Phytol 192, 747-59.

 


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Grateful acknowledgment is made to the following: for plant names: Australian Plant Name Index, Australian National Herbarium http://www.anbg.gov.au/cpbr/databases/apni-search-full.html; ; The International Plant Names Index, Royal Botanic Gardens, Kew/Harvard University Herbaria/Australian National Herbarium http://www.ipni.org/index.html; Plants Database, United States Department of Agriculture, National Resources Conservation Service http://plants.usda.gov/;DJ Mabberley (1997) The Plant Book, Cambridge University Press (Second Edition); JH Wiersma and B Leon (1999) World Economic Plants, CRC Press; RJ Hnatiuk (1990) Census of Australian Vascular Plants, Australian Government Publishing Service; for information: Science Direct http://www.sciencedirect.com/; Wiley Online Library http://onlinelibrary.wiley.com/advanced/search; High Wire http://highwire.stanford.edu/cgi/search; Oxford Journals http://services.oxfordjournals.org/search.dtl; USDA National Agricultural Library http://agricola.nal.usda.gov/booleancube/booleancube_search_cit.html; for synonyms: The Plant List http://www.theplantlist.org/; for common names: http://en.wikipedia.org/wiki/Main_Page; etc.


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