Australian New Crops Info 2016
Supported by the Rural Industries Research and Development Corporation

Listing of Interesting Plants of the World:

Nicotiana obtusifolia

 

 

This species is usually known as:

Nicotiana obtusifolia

 

This species has no synonyms in The Plant List

 

Common names:

Desert Tobacco

 

 

Trends (five databases) 1901-2013:
[Number of papers mentioning Nicotiana obtusifolia: 30]

 

 

Popularity of Nicotiana obtusifolia over time
[Left-hand Plot: Plot of numbers of papers mentioning Nicotiana obtusifolia (histogram and left hand axis scale of left-hand plot) and line of best fit, 1901 to 2013 (equation and % variation accounted for in box); Right-hand Plot: Plot of a proportional micro index, derived from numbers of papers mentioning Nicotiana obtusifolia as a proportion (scaled by multiplying by one million) of the approximate total number of papers available in databases for that year (frequency polygon and left-hand axis scale of right-hand plot) and line of best fit, 1901 to 2013 (equation and % variation accounted for in box)] 

[For larger charts showing the numbers of papers that have mentioned this species over years, select this link; there are links to come back from there]

 

Keywords

[Total number of keywords included in the papers that mentioned this species: 132]

 

Nicotiana (5), Polyploidy (5), Allopolyploidy (4), Alkaloids (2), Autopolyploidy (2), Colchicine (2), Cytochrome P450 (2), Diploid (2), Floral scent (2), Glutamine synthetase (2), Homoploid hybridization (2), Homoterpene (2), Indirect defense (2), Low-copy nuclear gene (2), Manduca sexta (2), Nicotiana attenuata (2), Nicotiana obtusifolia (2), Opium poppy (2), Plant volatiles (2), Polyploidization (2), Recombination (2), speciation (2), Terpene synthase (2), 17-Hydroxygeranyllinalool-diterpene-glycosides (1), adaptation (1), allotetraploid (1), Ambient smoke (1), amino acid sequences (1), complementary DNA (1), concerted evolution (1), desert grassland (1), Downy mildew (1), dryland river (1), Ethnopharmacology (1), evolution (1), flood disturbance (1), flow management (1), gene expression (1), genome duplication (1), Geranylgeranyl diphosphate synthase (1), Health care (1), Holocene (1), homoploid hybrid (1), hybridization (1), Immunity (1), insect pests (1), interlocus homogenization (1), Internet resource (1), introns (1), matK (1), Medicinal smoke (1), methyl jasmonate (1), Mimulus sookensis (1), molecular cloning (1), molecular sequence data (1), multiple origins (1), ndhF (1), Nicotiana clevelandii (1), Nicotiana quadrivalvis (1), Nicotiana tabacum (1), Oomycete (1), packrat middens (1), parental divergence (1), Pathogenesis-related protein (1), Peronospora tabacina (1), Phylogeny (1), phytophagous insects (1), pinyon–juniper woodland (1), plant pests (1), plant species richness (1), Pleistocene (1), pluvial lakes (1), pollen (1), Populus (1), promoter regions (1), reproductive isolation (1), retrotransposon (1), riparian vegetation (1), Salicylic acid (1), Salix (1), satellite repeats (1), sequence analysis (1), sequence-specific amplification polymorphism (SSAP) (1), signal transduction (1), Smoke directed at a specific organ (1), Smoke inhalation (1), Solanaceae (1), Southern blotting (1), stress (1), Systemic acquired resistance (1), Tamarix (1), telomeric heterochromatin (1), terminology (1), Tnt1 (1), Tobacco blue mold (1), trnL-F (1), trnS-G (1), trypsin inhibitors (1), vegetation history (1), Virus-induced-gene silencing (1), β 1,3-Glucanase (1)

 

[If all keywords are not here (as indicated by .....), they can be accessed from this link; there are links to come back from there]

 

 

Most likely scope for crop use/product (%):
[Please note: When there are only a few papers mentioning a species, care should be taken with the interpretation of these crop use/product results; as well, a mention may relate to the use of a species, or the context in which it grows, rather than a product]

 

smoking (96.97), hemiparasite (0.51), medicinal (0.39), fruit (0.20), poison (0.20), boundary (0.18), weed (0.15), wastewater treatment (0.13), genetics (0.09), starch (0.09)…..

 

[To see the full list of crop use/product outcomes, from searching abstracts of the papers that have mentioned this species, select this link; details of the analysis process have also been included; there are links to come back from there]

 

 

Recent mentions of this species in the literature:
[since 2012, with links to abstracts; The references from 1901-2013 which have been used for the trend, keyword and crop use/product analyses below, are listed below these references]

 

(2016) Graphical Contents List. Phytochemistry 130, 1-9. //www.sciencedirect.com/science/article/pii/S0031942216301662

Heiling S, Khanal S, Barsch A, Zurek G, Baldwin IT and Gaquerel E (2016) Using the knowns to discover the unknowns: MS-based dereplication uncovers structural diversity in 17-hydroxygeranyllinalool diterpene glycoside production in the Solanaceae. The Plant Journal 85, 561-577. http://dx.doi.org/10.1111/tpj.13119

Keilwagen J, Wenk M, Erickson JL, Schattat MH, Grau J and Hartung F (2016) Using intron position conservation for homology-based gene prediction. Nucleic Acids Res. 44, e89-. http://nar.oxfordjournals.org/cgi/content/abstract/44/9/e89

Kroumova ABM, Zaitlin D and Wagner GJ (2016) Natural variability in acyl moieties of sugar esters produced by certain tobacco and other Solanaceae species. Phytochemistry 130, 218-227. //www.sciencedirect.com/science/article/pii/S0031942216301108

Stanton MA, Pre?ler J, Paetz C, Boland W, Svatoš A and Baldwin IT (2016) Plant?mediated pheromone emission by a hemipteran seed feeder increases the apparency of an unreliable but rewarding host. new phytologist. 211, 113-125. http://dx.doi.org/10.1111/nph.13879

Stanton MA, Preβler J, Paetz C, Boland W, Svatoš A and Baldwin IT (2016) Plant-mediated pheromone emission by a hemipteran seed feeder increases the apparency of an unreliable but rewarding host. New Phytologist 211, 113-125. http://dx.doi.org/10.1111/nph.13879

Villaseñor JL (2016) Checklist of the native vascular plants of Mexico. Revista Mexicana de Biodiversidad 87, 559-902. //www.sciencedirect.com/science/article/pii/S1870345316300707

Zumajo-Cardona C and Pabon-Mora N (2016) Evolution of the APETALA2 Gene Lineage in Seed Plants. Mol. Biol. Evol. 33, 1818-1832. http://mbe.oxfordjournals.org/cgi/content/abstract/33/7/1818

Bateman HL, Stromberg JC, Banville MJ, Makings E, Scott BD, Suchy A and Wolkis D (2015) Novel water sources restore plant and animal communities along an urban river. Ecohydrology 8, 792-811. http://dx.doi.org/10.1002/eco.1560

del Pozo JC and Ramirez-Parra E (2015) Whole genome duplications in plants: an overview from Arabidopsis. J. Exp. Bot. 66, 6991-7003. http://jxb.oxfordjournals.org/cgi/content/abstract/66/22/6991

Grotewold E, Chappell J and Kellogg EA (2015) The Shifting Genomic Landscape. In Plant Genes, Genomes and Genetics (Ed.^(Eds  pp. 17-44. (John Wiley & Sons, Ltd). http://dx.doi.org/10.1002/9781118539385.ch2

McCarthy EW, Arnold SEJ, et al. (2015) The effect of polyploidy and hybridization on the evolution of floral colour in Nicotiana (Solanaceae). Ann. Bot. 115, 1117-1131. http://aob.oxfordjournals.org/cgi/content/abstract/115/7/1117

Ekanayaka EAP, Li C and Jones AD (2014) Sesquiterpenoid glycosides from glandular trichomes of the wild tomato relative Solanum habrochaites. Phytochemistry 98, 223-231. //www.sciencedirect.com/science/article/pii/S0031942213004469

Park SJ, Eshed Y and Lippman ZB (2014) Meristem maturation and inflorescence architecture — lessons from the Solanaceae. Current Opinion in Plant Biology 17, 70-77. //www.sciencedirect.com/science/article/pii/S1369526613001799

Aversano R, Caruso I, Aronne G, Micco VD, Scognamiglio N and Carputo D (2013) Stochastic changes affect Solanum wild species following autopolyploidization. J. Exp. Bot. 64, 625-635. http://jxb.oxfordjournals.org/cgi/content/abstract/64/2/625

Dar TH, Raina SN and Goel S (2013) Molecular analysis of genomic changes in synthetic autotetraploid Phlox drummondiiHook. Biological Journal of the Linnean Society 110, 591-605. http://dx.doi.org/10.1111/bij.12154

Eberle CA, Anderson NO, Clasen BM, Hegeman AD and Smith AG (2013) PELPIII: the class III pistil-specific extensin-like Nicotiana tabacum proteins are essential for interspecific incompatibility. The Plant Journal 74, 805-814. http://dx.doi.org/10.1111/tpj.12163

Renny-Byfield S, Kovarik A, et al. (2013) Diploidization and genome size change in allopolyploids is associated with differential dynamics of low- and high-copy sequences. The Plant Journal 74, 829-839. http://dx.doi.org/10.1111/tpj.12168

Vaughan MM, Wang Q, et al. (2013) Formation of the Unusual Semivolatile Diterpene Rhizathalene by the Arabidopsis Class I Terpene Synthase TPS08 in the Root Stele Is Involved in Defense against Belowground Herbivory. PLANT CELL 25, 1108-1125. http://www.plantcell.org/cgi/content/abstract/25/3/1108

Buggs Richard JA, Chamala S, Wu W, Tate Jennifer A, Schnable Patrick S, Soltis Douglas E, Soltis Pamela S and Barbazuk WB (2012) Rapid, Repeated, and Clustered Loss of Duplicate Genes in Allopolyploid Plant Populations of Independent Origin. Current Biology 22, 248-252. http://www.sciencedirect.com/science/article/pii/S0960982211014047

Buggs RJA, Renny-Byfield S, et al. (2012) Next-generation sequencing and genome evolution in allopolyploids. Am. J. Botany 99, 372-382. http://www.amjbot.org/cgi/content/abstract/99/2/372

Grover CE, Gallagher JP, Szadkowski EP, Yoo MJ, Flagel LE and Wendel JF (2012) Homoeolog expression bias and expression level dominance in allopolyploids. New Phytologist, n/a-n/a. http://dx.doi.org/10.1111/j.1469-8137.2012.04365.x

Modliszewski JL and Willis JH (2012) Allotetraploid Mimulus sookensis are highly interfertile despite independent origins. Molecular Ecology 21, 5280-5298. http://dx.doi.org/10.1111/j.1365-294X.2012.05706.x

Stromberg JC, Shafroth PB and Hazelton AF (2012) Legacies of flood reduction on a Dryland river. River Research and Applications 28, 143-159. http://dx.doi.org/10.1002/rra.1449

 

 

References 1901-2013 (and links to abstracts):
[Number of papers mentioning Nicotiana obtusifolia: 30; Any undated papers have been included at the end]

 

Aversano R, Caruso I, Aronne G, Micco VD, Scognamiglio N and Carputo D (2013) Stochastic changes affect Solanum wild species following autopolyploidization. J. Exp. Bot. 64, 625-635.  http://jxb.oxfordjournals.org/cgi/content/abstract/64/2/625

Vaughan MM, Wang Q, et al. (2013) Formation of the Unusual Semivolatile Diterpene Rhizathalene by the Arabidopsis Class I Terpene Synthase TPS08 in the Root Stele Is Involved in Defense against Belowground Herbivory. PLANT CELL 25, 1108-1125.  http://www.plantcell.org/cgi/content/abstract/25/3/1108

Buggs Richard JA, Chamala S, Wu W, Tate Jennifer A, Schnable Patrick S, Soltis Douglas E, Soltis Pamela S and Barbazuk WB (2012) Rapid, Repeated, and Clustered Loss of Duplicate Genes in Allopolyploid Plant Populations of Independent Origin. Current Biology 22, 248-252.  http://www.sciencedirect.com/science/article/pii/S0960982211014047

Buggs RJA, Renny-Byfield S, et al. (2012) Next-generation sequencing and genome evolution in allopolyploids. Am. J. Botany 99, 372-382.  http://www.amjbot.org/cgi/content/abstract/99/2/372

Grover CE, Gallagher JP, Szadkowski EP, Yoo MJ, Flagel LE and Wendel JF (2012) Homoeolog expression bias and expression level dominance in allopolyploids. New Phytologist, n/a-n/a.  http://dx.doi.org/10.1111/j.1469-8137.2012.04365.x

Modliszewski JL and Willis JH (2012) Allotetraploid Mimulus sookensis are highly interfertile despite independent origins. Molecular Ecology 21, 5280-5298.  http://dx.doi.org/10.1111/j.1365-294X.2012.05706.x

Stromberg JC, Shafroth PB and Hazelton AF (2012) Legacies of flood reduction on a Dryland river. River Research and Applications 28, 143-159.  http://dx.doi.org/10.1002/rra.1449

Bennett MD and Leitch IJ (2011) Nuclear DNA amounts in angiosperms: targets, trends and tomorrow. Ann. Bot. 107, 467-590.  http://aob.oxfordjournals.org/cgi/content/abstract/107/3/467

Hu G, Houston NL, Pathak D, Schmidt L, Thelen JJ and Wendel JF (2011) Genomically Biased Accumulation of Seed Storage Proteins in Allopolyploid Cotton. Genetics 189, 1103-1115.  http://www.genetics.org/cgi/content/abstract/189/3/1103

Patel D, Power JB, Anthony P, Badakshi F, Heslop-Harrison JS and Davey MR (2011) Somatic hybrid plants of Nicotiana x sanderae (+) N. debneyi with fungal resistance to Peronospora tabacina. Ann. Bot. 108, 809-819.  http://aob.oxfordjournals.org/cgi/content/abstract/108/5/809

Tholl D, Sohrabi R, Huh J-H and Lee S (2011) The biochemistry of homoterpenes – Common constituents of floral and herbivore-induced plant volatile bouquets. Phytochemistry 72, 1635-1646.  http://www.sciencedirect.com/science/article/pii/S0031942211000458

(2010) Graphical Contents List. Phytochemistry 71, 1027-1031.  http://www.sciencedirect.com/science/article/pii/S0031942210001937

Anssour S and Baldwin IT (2010) Variation in Antiherbivore Defense Responses in Synthetic Nicotiana Allopolyploids Correlates with Changes in Uniparental Patterns of Gene Expression. Plant Physiology 153, 1907-1918.  http://www.plantphysiol.org/cgi/content/abstract/153/4/1907

BorrÁS-Hidalgo O, Thomma BPHJ, Silva Y, ChacÓN O and Pujol M (2010) Tobacco blue mould disease caused by Peronospora hyoscyami f. sp. tabacina. Molecular Plant Pathology 11, 13-18.  http://dx.doi.org/10.1111/j.1364-3703.2009.00569.x

Clarkson JJ, Kelly LJ, Leitch AR, Knapp S and Chase MW (2010) Nuclear glutamine synthetase evolution in Nicotiana: Phylogenetics and the origins of allotetraploid and homoploid (diploid) hybrids. Molecular Phylogenetics and Evolution 55, 99-112.  http://www.sciencedirect.com/science/article/pii/S1055790309003972

Jassbi A, Zamanizadehnajari S and Baldwin I (2010) 17-Hydroxygeranyllinalool glycosides are major resistance traits of Nicotiana obtusifolia against attack from tobacco hornworm larvae. Phytochemistry 71, 1115-21.

Jassbi AR, Zamanizadehnajari S and Baldwin IT (2010) 17-Hydroxygeranyllinalool glycosides are major resistance traits of Nicotiana obtusifolia against attack from tobacco hornworm larvae. Phytochemistry 71, 1115-1121.  http://www.sciencedirect.com/science/article/pii/S003194221000138X

Koukalova B, Moraes AP, Renny-Byfield S, Matyasek R, Leitch AR and Kovarik A (2010) Fall and rise of satellite repeats in allopolyploids of Nicotiana over c. 5 million years. New Phytologist 186, 148-160.  http://dx.doi.org/10.1111/j.1469-8137.2009.03101.x

Mishra BK, Pathak S, Sharma A, Trivedi PK and Shukla S (2010) Modulated gene expression in newly synthesized auto-tetraploid of Papaver somniferum L. South African Journal of Botany 76, 447-452.  http://www.sciencedirect.com/science/article/pii/S0254629910001080

Petit M, Guidat C, et al. (2010) Mobilization of retrotransposons in synthetic allotetraploid tobacco. New Phytologist 186, 135-147.  http://dx.doi.org/10.1111/j.1469-8137.2009.03140.x

Anssour S, Krugel T, Sharbel TF, Saluz HP, Bonaventure G and Baldwin IT (2009) Phenotypic, genetic and genomic consequences of natural and synthetic polyploidization of Nicotiana attenuata and Nicotiana obtusifolia. Ann. Bot. 103, 1207-1217.  http://aob.oxfordjournals.org/cgi/content/abstract/103/8/1207

Paun O, Forest F, Fay MF and Chase MW (2009) Hybrid speciation in angiosperms: parental divergence drives ploidy. New Phytologist 182, 507-518.  http://dx.doi.org/10.1111/j.1469-8137.2009.02767.x

Jones L, Keining T, Eamens A and Vaistij FE (2006) Virus-Induced Gene Silencing of Argonaute Genes in Nicotiana benthamiana Demonstrates That Extensive Systemic Silencing Requires Argonaute1-Like and Argonaute4-Like Genes. Plant Physiology 141, 598-606.  http://www.plantphysiol.org/cgi/content/abstract/141/2/598

Mohagheghzadeh A, Faridi P, Shams-Ardakani M and Ghasemi Y (2006) Medicinal smokes. Journal of Ethnopharmacology 108, 161-184.  http://www.sciencedirect.com/science/article/pii/S0378874106004314

Wu J, Hettenhausen C and Baldwin IT (2006) Evolution of proteinase inhibitor defenses in North American allopolyploid species of Nicotiana. Planta. 224, 750-760.  http://dx.doi.org/10.1007/s00425-006-0256-6

Clarkson JJ, Knapp S, Garcia VF, Olmstead RG, Leitch AR and Chase MW (2004) Phylogenetic relationships in Nicotiana (Solanaceae) inferred from multiple plastid DNA regions. Molecular Phylogenetics and Evolution 33, 75-90.  http://www.sciencedirect.com/science/article/pii/S1055790304001447

Funnell DL, Lawrence CB, Pedersen JF and Schardl CL (2004) Expression of the tobacco β-1,3-glucanase gene, PR-2d, following induction of SAR with Peronospora tabacina. Physiological and Molecular Plant Pathology 65, 285-296.  http://www.sciencedirect.com/science/article/pii/S0885576505000470

Heist EP, Zaitlin D, Funnell DL, Nesmith WC and Schardl CL (2004) Necrotic Lesion Resistance Induced by Peronospora tabacina on Leaves of Nicotiana obtusifolia. Phytopathology 94, 1178-88.

Chase MW, Knapp S, Cox AV, Clarkson JJ, Butsko Y, Joseph J, Savolainen V and Parokonny AS (2003) Molecular Systematics, GISH and the Origin of Hybrid Taxa in Nicotiana (Solanaceae). Ann. Bot. 92, 107-127.  http://aob.oxfordjournals.org/cgi/content/abstract/92/1/107

Holmgren CA, Peñalba MC, Rylander KA and Betancourt JL (2003) A 16,000 14C yr B.P. packrat midden series from the USA–Mexico Borderlands. Quaternary Research 60, 319-329.  http://www.sciencedirect.com/science/article/pii/S0033589403001303

Graphical Contents List. Phytochemistry 71, 1027-1031.  http://www.sciencedirect.com/science/article/pii/S0031942210001937

Anssour S and Baldwin IT Variation in Antiherbivore Defense Responses in Synthetic Nicotiana Allopolyploids Correlates with Changes in Uniparental Patterns of Gene Expression. Plant Physiology 153, 1907-1918.  http://www.plantphysiol.org/cgi/content/abstract/153/4/1907

Bennett MD and Leitch IJ Nuclear DNA amounts in angiosperms: targets, trends and tomorrow. Ann. Bot. 107, 467-590.  http://aob.oxfordjournals.org/cgi/content/abstract/107/3/467

Buggs Richard JA, Chamala S, Wu W, Tate Jennifer A, Schnable Patrick S, Soltis Douglas E, Soltis Pamela S and Barbazuk W B Rapid, Repeated, and Clustered Loss of Duplicate Genes in Allopolyploid Plant Populations of Independent Origin. Current Biology 22, 248-252.  http://www.sciencedirect.com/science/article/pii/S0960982211014047

Clarkson JJ, Kelly LJ, Leitch AR, Knapp S and Chase MW Nuclear glutamine synthetase evolution in Nicotiana: Phylogenetics and the origins of allotetraploid and homoploid (diploid) hybrids. Molecular Phylogenetics and Evolution 55, 99-112.  http://www.sciencedirect.com/science/article/pii/S1055790309003972

Hu G, Houston NL, Pathak D, Schmidt L, Thelen JJ and Wendel JF Genomically Biased Accumulation of Seed Storage Proteins in Allopolyploid Cotton. Genetics 189, 1103-1115.  http://www.genetics.org/cgi/content/abstract/189/3/1103

Jassbi AR, Zamanizadehnajari S and Baldwin IT 17-Hydroxygeranyllinalool glycosides are major resistance traits of Nicotiana obtusifolia against attack from tobacco hornworm larvae. Phytochemistry 71, 1115-21.

Mishra BK, Pathak S, Sharma A, Trivedi PK and Shukla S Modulated gene expression in newly synthesized auto-tetraploid of Papaver somniferum L. South African Journal of Botany 76, 447-452.  http://www.sciencedirect.com/science/article/pii/S0254629910001080

Tholl D, Sohrabi R, Huh J-H and Lee S The biochemistry of homoterpenes – Common constituents of floral and herbivore-induced plant volatile bouquets. Phytochemistry 72, 1635-1646.  http://www.sciencedirect.com/science/article/pii/S0031942211000458

 


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Grateful acknowledgment is made to the following: for plant names: Australian Plant Name Index, Australian National Herbarium http://www.anbg.gov.au/cpbr/databases/apni-search-full.html; ; The International Plant Names Index, Royal Botanic Gardens, Kew/Harvard University Herbaria/Australian National Herbarium http://www.ipni.org/index.html; Plants Database, United States Department of Agriculture, National Resources Conservation Service http://plants.usda.gov/;DJ Mabberley (1997) The Plant Book, Cambridge University Press (Second Edition); JH Wiersma and B Leon (1999) World Economic Plants, CRC Press; RJ Hnatiuk (1990) Census of Australian Vascular Plants, Australian Government Publishing Service; for information: Science Direct http://www.sciencedirect.com/; Wiley Online Library http://onlinelibrary.wiley.com/advanced/search; High Wire http://highwire.stanford.edu/cgi/search; Oxford Journals http://services.oxfordjournals.org/search.dtl; USDA National Agricultural Library http://agricola.nal.usda.gov/booleancube/booleancube_search_cit.html; for synonyms: The Plant List http://www.theplantlist.org/; for common names: http://en.wikipedia.org/wiki/Main_Page; etc.


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