Australian New Crops Info 2016
Supported by the Rural Industries Research and Development Corporation

Listing of Interesting Plants of the World:

Nicotiana occidentalis

 

 

This species name is described as Unresolved in The Plant List

 

This species has no synonyms in The Plant List

 

Common names:

Native Tobacco

 

 

Trends (five databases) 1901-2013:
[Number of papers mentioning Nicotiana occidentalis: 107]

 

 

Popularity of Nicotiana occidentalis over time
[Left-hand Plot: Plot of numbers of papers mentioning Nicotiana occidentalis (histogram and left hand axis scale of left-hand plot) and line of best fit, 1901 to 2013 (equation and % variation accounted for in box); Right-hand Plot: Plot of a proportional micro index, derived from numbers of papers mentioning Nicotiana occidentalis as a proportion (scaled by multiplying by one million) of the approximate total number of papers available in databases for that year (frequency polygon and left-hand axis scale of right-hand plot) and line of best fit, 1901 to 2013 (equation and % variation accounted for in box)] 

[For larger charts showing the numbers of papers that have mentioned this species over years, select this link; there are links to come back from there]

 

Keywords

[Total number of keywords included in the papers that mentioned this species: 657]

 

ACLSV (2), Nicotiana (20), nicotiana occidentalis (18), plant viruses (14), detection (9), RNA (8), Apple stem pitting virus (7), Nicotiana benthamiana (7), nucleotide sequences (7), disease transmission (6), enzyme-linked immunosorbent assay (6), host plants (6), Internet resource (6), Malus domestica (6), plant diseases and disorders (6), molecular sequence data (5), polymerase chain reaction (5), RT-PCR <ARROW (5), symptoms (5), Virus (5), Argentina (4), diagnostic techniques (4), epidemiology (4), mechanical transmission (4), Mediterranean (4), microbial genetics (4), new host records (4), Phylogeny (4), Chenopodium quinoa (3), complementary DNA (3), disease diagnosis (3), new geographic records (3), Nicotiana clevelandii (3), Plum pox virus (3), Polyploidy (3), Potato virus X (3), Potyvirus (3), Prunus persica (3), Pyrus communis (3), serological relationships (3), SuCMoV (3), Sunflower chlorotic mottle virus (3), Trichovirus (3), virus indicators (3), Allium (2), AMV (2), antiserum (2), Aphid transmission (2), Apple stem grooving virus (2), Asparagus officinalis (2), Asparagus virus decline (2), Blueberry scorch virus (2), Brazil (2), Carlavirus (2), Chloroplastic proteins (2), Closterovirus (2), coat proteins (2), Contig (2), control (2), cytopathogenicity (2), Deep sequencing (2), Diagnosis (2), Dipsacus fullonum (2), disease (2), Disease control (2), disease resistanceDOWN> (2), disease vectors (2), double-stranded RNA (2), dsRNA (2), etiology (2), genetic vectors (2), Glutamine synthetase (2), grapes (2), Grapevine (2), Homoploid hybridization (2), host range (2), immunologic techniques (2), isolation (2), leaves (2), Lettuce (2), LMV (2), Low-copy nuclear gene (2), Mediterranean basin (2), Nicotiana glutinosa (2), nicotiana hesperis (2), Olpidium brassicae (2), Oxidative stress (2), pathogen identification (2), PepMV (2), Peptide de novo sequencing (2), Peptide sequencing (2)…..

 

[If all keywords are not here (as indicated by .....), they can be accessed from this link; there are links to come back from there]

 

 

Most likely scope for crop use/product (%):
[Please note: When there are only a few papers mentioning a species, care should be taken with the interpretation of these crop use/product results; as well, a mention may relate to the use of a species, or the context in which it grows, rather than a product]

 

plant grafting (68.26), sweetener (7.60), poison (4.55), medicinal (3.32), model (2.52), grain legume (1.72), ornamental (1.54), cane/bamboo (1.53), nutraceutical (0.76), oilseed/fat (0.74)…..

 

[To see the full list of crop use/product outcomes, from searching abstracts of the papers that have mentioned this species, select this link; details of the analysis process have also been included; there are links to come back from there]

 

 

Recent mentions of this species in the literature:
[since 2012, with links to abstracts; The references from 1901-2013 which have been used for the trend, keyword and crop use/product analyses below, are listed below these references]

 

Fujita N, Komatsu K, et al. (2017) N-terminal region of cysteine-rich protein (CRP) in carlaviruses is involved in the determination of symptom types. Molecular Plant Pathology, n/a-n/a. http://dx.doi.org/10.1111/mpp.12513

Holz S, Duduk B, Büttner C and Kube M (2016) Genetic variability of Alder yellows phytoplasma in Alnus glutinosa in its natural Spreewald habitat. Forest Pathology 46, 11-21. http://dx.doi.org/10.1111/efp.12206

Kroumova ABM, Zaitlin D and Wagner GJ (2016) Natural variability in acyl moieties of sugar esters produced by certain tobacco and other Solanaceae species. Phytochemistry 130, 218-227. //www.sciencedirect.com/science/article/pii/S0031942216301108

Wang J, Meng F, Chen R, Liu J, Nie X and Nie B (2016) RT-PCR Differentiation, Molecular and Pathological Characterization of Andean and Ordinary Strains of Potato virus S in Potatoes in China. Plant Disease. 100, 1580-1585. http://dx.doi.org/10.1094%2FPDIS-11-15-1257-RE

Blystad D-R, van der Vlugt R, et al. (2015) Host range and symptomatology of Pepino mosaic virus strains occurring in Europe. European journal of plant pathology. 143, 43-56. http://dx.doi.org/10.1007/s10658-015-0664-1

Faoro F and Gozzo F (2015) Is modulating virus virulence by induced systemic resistance realistic? Plant Science 234, 1-13. //www.sciencedirect.com/science/article/pii/S0168945215000308

Menschaert G and Fenyö D (2015) Proteogenomics from a bioinformatics angle: A growing field. Mass Spectrometry Reviews, n/a-n/a. http://dx.doi.org/10.1002/mas.21483

Sauer S and Luge T (2015) Nutriproteomics: Facts, concepts, and perspectives. PROTEOMICS 15, 997-1013. http://dx.doi.org/10.1002/pmic.201400383

(2014) Contents: Proteomics 1614. PROTEOMICS 14, NA-NA. http://dx.doi.org/10.1002/pmic.201470122

Cheng YH, Zheng YX, Tai CH, Yen JH, Chen YK and Jan FJ (2014) Identification, characterisation and detection of a new tospovirus on sweet pepper. Annals of Applied Biology 164, 107-115. http://dx.doi.org/10.1111/aab.12084

Cillo F and Palukaitis P (2014) Chapter Two - Transgenic Resistance. In Advances in Virus Research (Ed.^(Eds Gad L and Nikolaos K) pp. 35-146. (Academic Press). //www.sciencedirect.com/science/article/pii/B9780128012468000020

Luge T, Kube M, Freiwald A, Meierhofer D, Seemüller E and Sauer S (2014) Transcriptomics assisted proteomic analysis of Nicotiana occidentalis infected by CandidatusPhytoplasma mali strain AT. PROTEOMICS 14, 1882-1889. http://dx.doi.org/10.1002/pmic.201300551

Lyu MD, Li XM, Guo R, Li MJ, Liu XM, Wang Q and Cheng YQ (2014) Prevalence and distribution of Grapevine leafroll-associated virus 7 in China detected by an improved reverse transcription polymerase chain reaction assay. Plant Pathology 63, 1168-1176. http://dx.doi.org/10.1111/ppa.12195

Navas-Castillo J, López-Moya JJ and Aranda MA (2014) Whitefly-transmitted RNA viruses that affect intensive vegetable production. Annals of Applied Biology 165, 155-171. http://dx.doi.org/10.1111/aab.12147

Schneider B, Sule S, Jelkmann W and Seemüller E (2014) Suppression of Aggressive Strains of ‘Candidatus Phytoplasma mali’ by Mild Strains in Catharanthus roseus and Nicotiana occidentalis and Indication of Similar Action in Apple Trees. Phytopathology. 104, 453-461. http://dx.doi.org/10.1094%2FPHYTO-08-13-0230-R

Woo ENY and Pearson MN (2014) Biological and molecular variation of Cherry leaf roll virus isolates from Malus domestica, Ribes rubrum, Rubus idaeus, Rumex obtusifolius and Vaccinium darrowii. Plant Pathology 63, 838-845. http://dx.doi.org/10.1111/ppa.12166

Adams IP, Miano DW, et al. (2013) Use of next-generation sequencing for the identification and characterization of Maize chlorotic mottle virus and Sugarcane mosaic virus causing maize lethal necrosis in Kenya. Plant Pathology 62, 741-749. http://dx.doi.org/10.1111/j.1365-3059.2012.02690.x

Bejerman N, Giolitti F, de Breuil S and Lenardon S (2013) Development of a full-length infectious clone of sunflower chlorotic mottle virus (SuCMoV). Archives of virology. 158, 485-490. http://dx.doi.org/10.1007/s00705-012-1497-2

Lukhovitskaya NI, Solovieva AD, Boddeti SK, Thaduri S, Solovyev AG and Savenkov EI (2013) An RNA Virus-Encoded Zinc-Finger Protein Acts as a Plant Transcription Factor and Induces a Regulator of Cell Size and Proliferation in Two Tobacco Species. PLANT CELL 25, 960-973. http://www.plantcell.org/cgi/content/abstract/25/3/960

Meng B, Venkataraman S, Li C, Wang W, Dayan-Glick C and Mawassi M (2013) Construction and biological activities of the first infectious cDNA clones of the genus Foveavirus. Virology 435, 453-462. //www.sciencedirect.com/science/article/pii/S0042682212004977

Munyaneza JE and Henne DC (2013) Chapter 4 - Leafhopper and Psyllid Pests of Potato. In Insect Pests of Potato (Ed.^(Eds  pp. 65-102. (Academic Press: San Diego). //www.sciencedirect.com/science/article/pii/B9780123868954000041

Roenhorst JW, Botermans M and Verhoeven JTJ (2013) Quality control in bioassays used in screening for plant viruses. EPPO Bulletin 43, 244-249. http://dx.doi.org/10.1111/epp.12034

Verbeek M, Dullemans AM, van Bekkum PJ and van der Vlugt RAA (2013) Evidence for Lettuce big-vein associated virus as the causal agent of a syndrome of necrotic rings and spots in lettuce. Plant Pathology 62, 444-451. http://dx.doi.org/10.1111/j.1365-3059.2012.02645.x

(2012) Family - Betaflexiviridae. In Virus Taxonomy (Ed.^(Eds Andrew MQK, Elliot L, et al.) pp. 920-941. (Elsevier: San Diego). http://www.sciencedirect.com/science/article/pii/B9780123846846000781

Adams IP, Miano DW, et al. (2012) Use of next-generation sequencing for the identification and characterization of Maize chlorotic mottle virus and Sugarcane mosaic virus causing maize lethal necrosis in Kenya. Plant Pathology, n/a-n/a. http://dx.doi.org/10.1111/j.1365-3059.2012.02690.x

Bejerman N, Giolitti F, de Breuil S and Lenardon S (2012) Development of a full-length infectious clone of sunflower chlorotic mottle virus (SuCMoV). Arch Virol.

Blouin A, Chavan R, Pearson M, MacDiarmid R and Cohen D (2012) Detection and characterisation of two novel vitiviruses infecting Actinidia. Arch Virol 157, 713-22.

Blouin AG, Chavan RR, Pearson MN, MacDiarmid RM and Cohen D (2012) Detection and characterisation of two novel vitiviruses infecting Actinidia. Archives of virology.. 157, 713-722. http://dx.doi.org/10.1007/s00705-011-1219-1

Fránová J and Jakešová H (2012) First Report of Bacilliform Badnavirus-like Virus Particles in Red Clover. Journal of Phytopathology 160, 588-590. http://dx.doi.org/10.1111/j.1439-0434.2012.01938.x

Giampetruzzi A, Roumi V, Roberto R, Malossini U, Yoshikawa N, La Notte P, Terlizzi F, Credi R and Saldarelli P (2012) A new grapevine virus discovered by deep sequencing of virus- and viroid-derived small RNAs in Cv Pinot gris. Virus Research 163, 262-268. http://www.sciencedirect.com/science/article/pii/S0168170211004047

Hanssen IM and Lapidot M (2012) Chapter 2 - Major Tomato Viruses in the Mediterranean Basin. In Advances in Virus Research (Ed.^(Eds Gad L and Hervé L) pp. 31-66. (Academic Press). http://www.sciencedirect.com/science/article/pii/B9780123943149000026

Katis NI, Maliogka VI and Dovas CI (2012) Chapter 5 - Viruses of the Genus Allium in the Mediterranean Region. In Advances in Virus Research (Ed.^(Eds Gad L and Hervé L) pp. 163-208. (Academic Press). http://www.sciencedirect.com/science/article/pii/B9780123943149000051

Maliogka VI, Salvador B, Carbonell A, SÁEnz P, LeÓN DS, Oliveros JC, Delgadillo MO, GarcÍA JA and SimÓN-Mateo C (2012) Virus variants with differences in the P1 protein coexist in a Plum pox virus population and display particular host-dependent pathogenicity features. Molecular Plant Pathology 13, 877-886. http://dx.doi.org/10.1111/j.1364-3703.2012.00796.x

Moreno A and Fereres A (2012) Chapter 7 - Virus Diseases in Lettuce in the Mediterranean Basin. In Advances in Virus Research (Ed.^(Eds Gad L and Hervé L) pp. 247-288. (Academic Press). http://www.sciencedirect.com/science/article/pii/B9780123943149000075

Nagyova A, Kamencayova M, Glasa M and Subr Z (2012) The 3-proximal part of the Plum pox virus P1 gene determinates the symptom expression in two herbaceous host plants. Virus Genes 44, 505-12.

Nagyová A, Kamencayová M, Glasa M and Šubr ZW (2012) The 3?-proximal part of the Plum pox virus P1 gene determinates the symptom expression in two herbaceous host plants. Virus genes. 44, 505-512. http://dx.doi.org/10.1007/s11262-012-0726-9

Picoli MHS, De Souto ER, Da Silva JM, Carnelossi PR, Garcia A and Almeida ÁMR (2012) A Comovirus Infecting Rocket (Eruca sativa) in Brazil. Journal of Phytopathology 160, 55-57. http://dx.doi.org/10.1111/j.1439-0434.2011.01858.x

Rodríguez M, Muñoz N, Lenardon S and Lascano R (2012) The chlorotic symptom induced by Sunflower chlorotic mottle virus is associated with changes in redox-related gene expression and metabolites. Plant Science 196, 107-116. //www.sciencedirect.com/science/article/pii/S0168945212001665

Tezuka T and Marubashi W (2012) Genes in S and T subgenomes are responsible for hybrid lethality in interspecific hybrids between Nicotiana tabacum and Nicotiana occidentalis. PLoS One 7, e36204.

Tomassoli L, Tiberini A and Vetten H-J (2012) Chapter 10 - Viruses of Asparagus. In Advances in Virus Research (Ed.^(Eds Gad L and Hervé L) pp. 345-365. (Academic Press). http://www.sciencedirect.com/science/article/pii/B9780123943149000105

Veerakone S, Liefting LW, Lebas BSM and Ward L (2012) First Report of Cherry leaf roll virus in Hydrangea macrophylla. Plant Disease. 96, 463. http://dx.doi.org/10.1094/PDIS-08-11-0707

Verbeek M, Dullemans AM, van Bekkum PJ and van der Vlugt RAA (2012) Evidence for Lettuce big-vein associated virus as the causal agent of a syndrome of necrotic rings and spots in lettuce. Plant Pathology, no-no. http://dx.doi.org/10.1111/j.1365-3059.2012.02645.x

 

 

References 1901-2013 (and links to abstracts):
[Number of papers mentioning Nicotiana occidentalis: 107; Any undated papers have been included at the end]

 

Lukhovitskaya NI, Solovieva AD, Boddeti SK, Thaduri S, Solovyev AG and Savenkov EI (2013) An RNA Virus-Encoded Zinc-Finger Protein Acts as a Plant Transcription Factor and Induces a Regulator of Cell Size and Proliferation in Two Tobacco Species. PLANT CELL 25, 960-973.  http://www.plantcell.org/cgi/content/abstract/25/3/960

(2012) Family - Betaflexiviridae. In ‘Virus Taxonomy’ (Ed.^(Eds Andrew MQK, Elliot L, et al.) pp. 920-941. (Elsevier: San Diego). http://www.sciencedirect.com/science/article/pii/B9780123846846000781

Adams IP, Miano DW, et al. (2012) Use of next-generation sequencing for the identification and characterization of Maize chlorotic mottle virus and Sugarcane mosaic virus causing maize lethal necrosis in Kenya. Plant Pathology, n/a-n/a.  http://dx.doi.org/10.1111/j.1365-3059.2012.02690.x

Bejerman N, Giolitti F, de Breuil S and Lenardon S (2012) Development of a full-length infectious clone of sunflower chlorotic mottle virus (SuCMoV). Arch Virol.

Blouin A, Chavan R, Pearson M, MacDiarmid R and Cohen D (2012) Detection and characterisation of two novel vitiviruses infecting Actinidia. Arch Virol 157, 713-22.

Fránová J and Jakešová H (2012) First Report of Bacilliform Badnavirus-like Virus Particles in Red Clover. Journal of Phytopathology 160, 588-590.  http://dx.doi.org/10.1111/j.1439-0434.2012.01938.x

Giampetruzzi A, Roumi V, Roberto R, Malossini U, Yoshikawa N, La Notte P, Terlizzi F, Credi R and Saldarelli P (2012) A new grapevine virus discovered by deep sequencing of virus- and viroid-derived small RNAs in Cv Pinot gris. Virus Research 163, 262-268.  http://www.sciencedirect.com/science/article/pii/S0168170211004047

Hanssen IM and Lapidot M (2012) Chapter 2 - Major Tomato Viruses in the Mediterranean Basin. In ‘Advances in Virus Research’ (Ed.^(Eds Gad L and Hervé L) pp. 31-66. (Academic Press). http://www.sciencedirect.com/science/article/pii/B9780123943149000026

Katis NI, Maliogka VI and Dovas CI (2012) Chapter 5 - Viruses of the Genus Allium in the Mediterranean Region. In ‘Advances in Virus Research’ (Ed.^(Eds Gad L and Hervé L) pp. 163-208. (Academic Press). http://www.sciencedirect.com/science/article/pii/B9780123943149000051

Maliogka VI, Salvador B, Carbonell A, SÁEnz P, LeÓN DS, Oliveros JC, Delgadillo MO, GarcÍA JA and SimÓN-Mateo C (2012) Virus variants with differences in the P1 protein coexist in a Plum pox virus population and display particular host-dependent pathogenicity features. Molecular Plant Pathology 13, 877-886.  http://dx.doi.org/10.1111/j.1364-3703.2012.00796.x

Moreno A and Fereres A (2012) Chapter 7 - Virus Diseases in Lettuce in the Mediterranean Basin. In ‘Advances in Virus Research’ (Ed.^(Eds Gad L and Hervé L) pp. 247-288. (Academic Press). http://www.sciencedirect.com/science/article/pii/B9780123943149000075

Nagyova A, Kamencayova M, Glasa M and Subr Z (2012) The 3’-proximal part of the Plum pox virus P1 gene determinates the symptom expression in two herbaceous host plants. Virus Genes 44, 505-12.

Picoli MHS, De Souto ER, Da Silva JM, Carnelossi PR, Garcia A and Almeida ÁMR (2012) A Comovirus Infecting Rocket (Eruca sativa) in Brazil. Journal of Phytopathology 160, 55-57.  http://dx.doi.org/10.1111/j.1439-0434.2011.01858.x

Tezuka T and Marubashi W (2012) Genes in S and T subgenomes are responsible for hybrid lethality in interspecific hybrids between Nicotiana tabacum and Nicotiana occidentalis. PLoS One 7, e36204.

Tomassoli L, Tiberini A and Vetten H-J (2012) Chapter 10 - Viruses of Asparagus. In ‘Advances in Virus Research’ (Ed.^(Eds Gad L and Hervé L) pp. 345-365. (Academic Press). http://www.sciencedirect.com/science/article/pii/B9780123943149000105

Verbeek M, Dullemans AM, van Bekkum PJ and van der Vlugt RAA (2012) Evidence for Lettuce big-vein associated virus as the causal agent of a syndrome of necrotic rings and spots in lettuce. Plant Pathology, no-no.  http://dx.doi.org/10.1111/j.1365-3059.2012.02645.x

Cuellar WJ, De Souza J, Barrantes I, Fuentes S and Kreuze JF (2011) Distinct cavemoviruses interact synergistically with sweet potato chlorotic stunt virus (genus Crinivirus) in cultivated sweet potato. J. Gen. Virol. 92, 1233-1243.  http://vir.sgmjournals.org/cgi/content/abstract/92/5/1233

El Air M, Mahfoudi N, Digiaro M, Najjar A and Elbeaino T (2011) Detection of Olive-infecting Viruses in Tunisia. Journal of Phytopathology 159, 283-286.  http://dx.doi.org/10.1111/j.1439-0434.2010.01771.x

Ladiges PY, Marks CE and Nelson G (2011) Biogeography of Nicotiana section Suaveolentes (Solanaceae) reveals geographical tracks in arid Australia. Journal of Biogeography 38, 2066-2077.  http://dx.doi.org/10.1111/j.1365-2699.2011.02554.x

Li L and Yang H (2011) Preparation of Antiserum to Apple stem pitting virus Using in Silico Prediction of Antigenic Epitopes. Journal of Phytopathology 159, 676-681.  http://dx.doi.org/10.1111/j.1439-0434.2011.01825.x

Robertson K, Goldberg EE and Igić B (2011) COMPARATIVE EVIDENCE FOR THE CORRELATED EVOLUTION OF POLYPLOIDY AND SELF-COMPATIBILITY IN SOLANACEAE. Evolution 65, 139-155.  http://dx.doi.org/10.1111/j.1558-5646.2010.01099.x

Blouin AG, Greenwood DR, Chavan RR, Pearson MN, Clover GRG, MacDiarmid RM and Cohen D (2010) A generic method to identify plant viruses by high-resolution tandem mass spectrometry of their coat proteins. Journal of Virological Methods 163, 49-56.  http://www.sciencedirect.com/science/article/pii/S0166093409003875

Ciuffo M, Mautino GC, Bosco L, Turina M and Tavella L (2010) Identification of Dictyothrips betae as the vector of Polygonum ring spot virus. Annals of Applied Biology 157, 299-307.  http://dx.doi.org/10.1111/j.1744-7348.2010.00428.x

Clarkson JJ, Kelly LJ, Leitch AR, Knapp S and Chase MW (2010) Nuclear glutamine synthetase evolution in Nicotiana: Phylogenetics and the origins of allotetraploid and homoploid (diploid) hybrids. Molecular Phylogenetics and Evolution 55, 99-112.  http://www.sciencedirect.com/science/article/pii/S1055790309003972

Giolitti FJ, Bejerman NE, De Breuil S and Lenardon SL (2010) Identification and Characterization of a New Strain of Sunflower chlorotic mottle virus, a Potyvirus Infecting Asteraceae in Argentina. Journal of Phytopathology 158, 536-541.  http://dx.doi.org/10.1111/j.1439-0434.2009.01656.x

Rodríguez M, Taleisnik E, Lenardon S and Lascano R (2010) Are Sunflower chlorotic mottle virus infection symptoms modulated by early increases in leaf sugar concentration? Journal of Plant Physiology 167, 1137-1144.  http://www.sciencedirect.com/science/article/pii/S0176161710001215

Winter S, Koerbler M, Stein B, Pietruszka A, Paape M and Butgereitt A (2010) Analysis of cassava brown streak viruses reveals the presence of distinct virus species causing cassava brown streak disease in East Africa. J. Gen. Virol. 91, 1365-1372.  http://vir.sgmjournals.org/cgi/content/abstract/91/5/1365

Adams IP, Glover RH, Monger WA, Mumford R, Jackeviciene E, Navalinskiene M, Samuitiene M and Boonham N (2009) Next-generation sequencing and metagenomic analysis: a universal diagnostic tool in plant virology. Molecular Plant Pathology 10, 537-545.  http://dx.doi.org/10.1111/j.1364-3703.2009.00545.x

Giolitti F, Bejerman N and Lenardon S (2009) Dipsacus fullonum: an Alternative Host of Sunflower chlorotic mottle virus in Argentina. Journal of Phytopathology 157, 325-328.  http://dx.doi.org/10.1111/j.1439-0434.2008.01501.x

Giolitti Fn, Bejerman Ns and Lenardon S (2009) Dipsacus fullonum: an Alternative Host of Sunflower chlorotic mottle virus in Argentina. Journal of phytopathology. 157, 325-328.  http://dx.doi.org/10.1111/j.1439-0434.2008.01501.x

Igarashi A, Yamagata K, et al. (2009) Apple latent spherical virus vectors for reliable and effective virus-induced gene silencing among a broad range of plants including tobacco, tomato, Arabidopsis thaliana, cucurbits, and legumes. Virology. 10, 2.  http://dx.doi.org/10.1016/j.virol.2009.01.039

MatouŠek J, Schubert Jr and DÄ›diC P (2009) Complementation analysis of triple gene block of Potato virus S (PVS) revealed its capability to support systemic infection and aphid transmissibility of recombinant Potato virus X. Virus Research 146, 81-88.  http://www.sciencedirect.com/science/article/pii/S0168170209003220

Matousek J, Schubert J and Dedic P (2009) Complementation analysis of triple gene block of Potato virus S (PVS) revealed its capability to support systemic infection and aphid transmissibility of recombinant Potato virus X. Virus Res 146, 81-8.

Matoušek J, Schubert J and Dědič P (2009) Complementation analysis of triple gene block of Potato virus S (PVS) revealed its capability to support systemic infection and aphid transmissibility of recombinant Potato virus X. Virus Research 146, 81-88.  http://www.sciencedirect.com/science/article/pii/S0168170209003220

Mbanzibwa DR, Tian Y, Mukasa SB and Valkonen JPT (2009) Cassava Brown Streak Virus (Potyviridae) Encodes a Putative Maf/HAM1 Pyrophosphatase Implicated in Reduction of Mutations and a P1 Proteinase That Suppresses RNA Silencing but Contains No HC-Pro. J. Virol. 83, 6934-6940.  http://jvi.asm.org/cgi/content/abstract/83/13/6934

N Y (2008) Capillovirus, Foveavirus, Trichovirus, Vitivirus. In ‘Encyclopedia of Virology (Third Edition)’ (Ed.^(Eds Editors-in-Chief:   BWJM and Regenmortel MHVv) pp. 419-427. (Academic Press: Oxford). http://www.sciencedirect.com/science/article/pii/B9780123744104003629

PRibylovÁ J, Špak J, Petrzik K, KubelkovÁ D and ŠpakovÁ V (2008) Sequence comparison and transmission of Blackcurrant reversion virus isolates in black, red and white currants with black currant reversion disease and full blossom disease symptoms. European journal of plant pathology. 121, 67-75.  http://dx.doi.org/10.1007/s10658-007-9245-2

Vives MC, Martin S, Ambros S, Renovell A, Navarro L, Pina JA, Moreno P and Guerri J (2008) Development of a full-genome cDNA clone of Citrus leaf blotch virus and infection of citrus plants. Mol Plant Pathol 9, 787-97.

Yaegashi H, Tamura A, Isogai M and Yoshikawa N (2008) Inhibition of long-distance movement of RNA silencing signals in Nicotiana benthamiana by Apple chlorotic leaf spot virus 50 kDa movement protein. Virology 382, 199-206.  http://www.sciencedirect.com/science/article/pii/S0042682208006077

Li H, Dai H-y, Zhang Z-h, Gao X-y, Du G-d and Zhang X-y (2007) Isolation and Identification of Virus dsRNA from Strawberry Plants. Agricultural Sciences in China 6, 86-93.  http://www.sciencedirect.com/science/article/pii/S1671292707600200

Tzanetakis IE and Martin RR (2007) Strawberry chlorotic fleck: Identification and characterization of a novel Closterovirus associated with the disease. Virus Research 124, 88-94.  http://www.sciencedirect.com/science/article/pii/S0168170206003261

Yaegashi H, Isogai M, Tajima H, Sano T and Yoshikawa N (2007) Combinations of two amino acids (Ala40 and Phe75 or Ser40 and Tyr75) in the coat protein of apple chlorotic leaf spot virus are crucial for infectivity. J. Gen. Virol. 88, 2611-2618.  http://vir.sgmjournals.org/cgi/content/abstract/88/9/2611

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Chase MW, Knapp S, Cox AV, Clarkson JJ, Butsko Y, Joseph J, Savolainen V and Parokonny AS (2003) Molecular Systematics, GISH and the Origin of Hybrid Taxa in Nicotiana (Solanaceae). Ann. Bot. 92, 107-127.  http://aob.oxfordjournals.org/cgi/content/abstract/92/1/107

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Komori T, Yamada S, Myers PN and Imaseki H (2003) Biphasic response to elevated levels of NaCl in Nicotiana occidentalis subspecies obliqua Burbidge. Plant Science 165, 159-165.  http://www.sciencedirect.com/science/article/pii/S0168945203001547

Spetz C, Taboada AM, Darwich S, Ramsell J, Salazar LF and Valkonen JPT (2003) Molecular resolution of a complex of potyviruses infecting solanaceous crops at the centre of origin in Peru. J. Gen. Virol. 84, 2565-2578.  http://vir.sgmjournals.org/cgi/content/abstract/84/9/2565

Stavolone L, Ragozzino A and Hohn T (2003) Characterization of Cestrum yellow leaf curling virus: a new member of the family Caulimoviridae. J. Gen. Virol. 84, 3459-3464.  http://vir.sgmjournals.org/cgi/content/abstract/84/12/3459

Thompson JR, Wetzel S, Klerks MM, Vašková D, Schoen CD, Špak J and Jelkmann W (2003) Multiplex RT-PCR detection of four aphid-borne strawberry viruses in Fragaria spp. in combination with a plant mRNA specific internal control. Journal of Virological Methods 111, 85-93.  http://www.sciencedirect.com/science/article/pii/S0166093403001642

Saenz P, Salvador B, Simon-Mateo C, Kasschau KD, Carrington JC and Garcia JA (2002) Host-Specific Involvement of the HC Protein in the Long-Distance Movement of Potyviruses. J. Virol. 76, 1922-1931.  http://jvi.asm.org/cgi/content/abstract/76/4/1922

Thompson JR, Leone G, Lindner JL, Jelkmann W and Schoen CD (2002) Characterization and complete nucleotide sequence of Strawberry mottle virus: a tentative member of a new family of bipartite plant picorna-like viruses. J. Gen. Virol. 83, 229-239.  http://vir.sgmjournals.org/cgi/content/abstract/83/1/229

Hoffmann K, Verbeek M, Romano A, Dullemans AM, van den Heuvel JF and van der Wilk F (2001) Mechanical transmission of poleroviruses. J Virol Methods 91, 197-201.

Hoffmann K, Verbeek M, Romano A, Dullemans AM, van den Heuvel JFJM and van der Wilk F (2001) Mechanical transmission of poleroviruses. Journal of Virological Methods 91, 197-201.  http://www.sciencedirect.com/science/article/pii/S0166093400002561

Klerks MM, Leone G, Lindner JL, Schoen CD and Heuvel JFJMvd (2001) Rapid and sensitive detection of Apple stem pitting virus in apple trees through RNA amplification and probing with fluorescent molecular beacons. Phytopathology. 91, 1085-1091.

Klerks MM, Leone G, Lindner JL, Schoen CD and van den Heuvel JF (2001) Rapid and Sensitive Detection of Apple stem pitting virus in Apple Trees Through RNA Amplification and Probing with Fluorescent Molecular Beacons. Phytopathology 91, 1085-91.

Marcone C and Seemuller E (2001) A chromosome map of the European stone fruit yellows phytoplasma. Microbiology 147, 1213-1221.  http://mic.sgmjournals.org/cgi/content/abstract/147/5/1213

Bouwen I and Vlugt RAAvd (2000) Natural infection of Alstroemeria brasiliensis with Lily mottle virus. Plant disease. 84, 103.

Hull R, Harper G and Lockhart B (2000) Viral sequences integrated into plant genomes. Trends in Plant Science 5, 362-365.  http://www.sciencedirect.com/science/article/pii/S1360138500017234

Lauer U and Seemuller E (2000) Physical Map of the Chromosome of the Apple Proliferation Phytoplasma. J. Bacteriol. 182, 1415-1418.  http://jb.asm.org/cgi/content/abstract/182/5/1415

Martinelli L, Costa D, Poletti V, Festi S, Buzkan N, Minafra A, Saldarelli P, Matelli GP and Perl A (2000) Genetic transformation of tobacco and grapevine for resistance to viruses related to the rugose wood disease complex. Acta horticulturae. 528, 1.

Posthuma KI, Adams AN and Hong Y (2000) Strawberry crinkle virus, a Cytorhabdovirus needing more attention from virologists. Mol Plant Pathol 1, 331-6.

Satoh H, Matsuda H, Kawamura T, Isogai M, Yoshikawa N and Takahashi T (2000) Intracellular distribution, cell-to-cell trafficking and tubule-inducing activity of the 50 kDa movement protein of Apple chlorotic leaf spot virus fused to green fluorescent protein. J. Gen. Virol. 81, 2085-2093.  http://vir.sgmjournals.org/cgi/content/abstract/81/8/2085

Yoshikawa N, Gotoh S, Umezawa M, Satoh N, Satoh H, Takahashi T, Ito T and Yoshida K (2000) Transgenic Nicotiana occidentalis Plants Expressing the 50-kDa Protein of Apple chlorotic leaf spot virus Display Increased Susceptibility to Homologous Virus, but Strong Resistance to Grapevine berry inner necrosis virus. Phytopathology 90, 311-6.

Berg M and Seemüller E (1999) Chromosomal organization and nucleotide sequence of the genes coding for the elongation factors G and Tu of the apple proliferation phytoplasma. Gene 226, 103-109.  http://www.sciencedirect.com/science/article/pii/S0378111998005526

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James D (1999) A simple and reliable protocol for the detection of apple stem grooving virus by RT-PCR and in a multiplex PCR assay. J Virol Methods 83, 1-9.

Jelkmann W (1999) Abstracts and Reviews

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Lim SH, Ko MK, Lee SJ, La YJ and Kim BD (1999) Cymbidium mosaic virus coat protein gene in antisense confers resistance to transgenic Nicotiana occidentalis. Mol Cells 9, 603-8.

Yoshikawa N, Oogake S, Terada M, Miyabayashi S, Ikeda Y, Takahashi T and Ogawa K (1999) Apple chlorotic leaf spot virus 50 kDa protein is targeted to plasmodesmata and accumulates in sieve elements in transgenic plant leaves. Arch Virol 144, 2475-83.

Franova-Honetsleg J, Erbenova M and Martin RR (1998) Isolation of tobacco necrosis virus from strawberry leaves in the Czech Republic. Acta Virol 42, 325-31.

James D and Howell WE (1998) Isolation and partial characterization of a filamentous virus associated with peach mosaic disease. Plant disease. 82, 909-913.

Leone G, Lindner JL, Meer FAvd, Schoen CD and Jongedijk G (1998) Symptoms on apple and pear indicators after back-transmission from Nicotiana occidentalis confirm the identity of apple stem pitting virus with pear vein yellows virus. Acta horticulturae. 472, 472.

Nemchinov L, Hadidi A and Faggioli F (1998) PCR-detection of apple stem pitting virus from pome fruit hosts and sequence variability among viral isolates. Acta horticulturae. 472, 472.

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Jelkmann W and Keim-Konrad R (1997) Immuno-capture polymerase chain reaction and plate-trapped ELISA for the detection of apple stem pitting virus. Phytopathologische Zeitschrift. 145, 499-503.

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Leone G, Lindner JL, Jongedijk G and Meer FAvd (1995) Back-transmission of a virus associated with apple stem pitting and pear vein yellows, from Nicotiana occidentalis to apple and pear indicators. Acta horticulturae. 386, 386.

Nemchinov L, Hadidi A, Foster JJ, Candresse T and Verderevskaya T (1995) Sensitive detection of apple chlorotic leaf spot virus from infected apple or peach tissue using RT-PCR, IC-RT-PCR, or multiplex IC-RT-PCR. Acta horticulturae. 386, 386.

Pilotti M, Faggioli F and Barba M (1995) Characterization of Italian isolates of pear vein yellows virus. Acta horticulturae. 386, 386.

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Hadidi A, Hansen AJ, Parish CL and Yang X (1991) Scar skin and dapple apple viroids are seed-borne and persistent in infected apple trees. Research in Virology 142, 289-296.  http://www.sciencedirect.com/science/article/pii/092325169190015U

Koganezawa H and Yanase H (1990) A new type of elongated virus isolated from apple trees containing the stem pitting agent. Plant disease. 74, 610-614.

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Tomassoli L, Tiberini A, Vetten H-J and Gad Loebenstein and HervÉ L Chapter 10 - Viruses of Asparagus. In ‘Advances in Virus Research’ (Ed.^(Eds  pp. 345-365. (Academic Press). http://www.sciencedirect.com/science/article/pii/B9780123943149000105

Winter S, Koerbler M, Stein B, Pietruszka A, Paape M and Butgereitt A Analysis of cassava brown streak viruses reveals the presence of distinct virus species causing cassava brown streak disease in East Africa. J. Gen. Virol. 91, 1365-1372.  http://vir.sgmjournals.org/cgi/content/abstract/91/5/1365

 


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Grateful acknowledgment is made to the following: for plant names: Australian Plant Name Index, Australian National Herbarium http://www.anbg.gov.au/cpbr/databases/apni-search-full.html; ; The International Plant Names Index, Royal Botanic Gardens, Kew/Harvard University Herbaria/Australian National Herbarium http://www.ipni.org/index.html; Plants Database, United States Department of Agriculture, National Resources Conservation Service http://plants.usda.gov/;DJ Mabberley (1997) The Plant Book, Cambridge University Press (Second Edition); JH Wiersma and B Leon (1999) World Economic Plants, CRC Press; RJ Hnatiuk (1990) Census of Australian Vascular Plants, Australian Government Publishing Service; for information: Science Direct http://www.sciencedirect.com/; Wiley Online Library http://onlinelibrary.wiley.com/advanced/search; High Wire http://highwire.stanford.edu/cgi/search; Oxford Journals http://services.oxfordjournals.org/search.dtl; USDA National Agricultural Library http://agricola.nal.usda.gov/booleancube/booleancube_search_cit.html; for synonyms: The Plant List http://www.theplantlist.org/; for common names: http://en.wikipedia.org/wiki/Main_Page; etc.


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